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Repository Analysis

anthropics/knowledge-work-plugins

Open source repository of plugins primarily intended for knowledge workers to use in Claude Cowork

2.8 Likely human-written View on GitHub
2.8
Adjusted Score
2.8
Raw Score
100%
Time Factor
2026-05-30
Last Push
18,231
Stars
Python
Language
182,692
Lines of Code
1115
Files
307
Pattern Hits
2026-05-31
Scan Date

Score History

Severity Breakdown

CRITICAL 0HIGH 16MEDIUM 103LOW 188

Pattern Findings

307 matches across 13 categories. Click a row to expand file-level details.

Decorative Section Separators76 hits · 208 pts
SeverityFileLineSnippet
MEDIUM…s/instrument-data-to-allotrope/scripts/validate_asm.py207# =============================================================================
MEDIUM…s/instrument-data-to-allotrope/scripts/validate_asm.py209# =============================================================================
MEDIUM…s/instrument-data-to-allotrope/scripts/validate_asm.py709# =============================================================================
MEDIUM…s/instrument-data-to-allotrope/scripts/validate_asm.py711# =============================================================================
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md181 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md183 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md193 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md195 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md206 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md208 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md215 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md217 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md236 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md238 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md248 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md250 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md282 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md284 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md292 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md294 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md339 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md341 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md347 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md349 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md450 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md452 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md458 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md460 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md468 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md470 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md537 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md539 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md549 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md551 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md16 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md18 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md44 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md46 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md71 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md73 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md94 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md96 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md112 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md114 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md129 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md131 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md161 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md163 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md262 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md264 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md318 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md320 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md364 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md366 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md378 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md380 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md403 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md405 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md425 // ═══════════════════════════════════════════════════════════════════════
MEDIUM…kills/video-sdk/windows/references/delegate-methods.md427 // ═══════════════════════════════════════════════════════════════════════
16 more matches not shown…
Excessive Try-Catch Wrapping64 hits · 78 pts
SeverityFileLineSnippet
MEDIUM…o-research/skills/scvi-tools/scripts/validate_adata.py365 print("Error: scanpy is required. Install with: pip install scanpy")
LOW…o-research/skills/scvi-tools/scripts/validate_adata.py372 except Exception as e:
MEDIUM…o-research/skills/scvi-tools/scripts/validate_adata.py373 print(f"Error loading file: {e}")
LOWbio-research/skills/scvi-tools/scripts/model_utils.py240 except Exception as e:
LOWbio-research/skills/scvi-tools/scripts/model_utils.py256 except Exception as e:
LOWbio-research/skills/scvi-tools/scripts/model_utils.py558 except Exception as e:
LOWbio-research/skills/scvi-tools/scripts/cluster_embed.py126 except Exception as e:
MEDIUMbio-research/skills/scvi-tools/scripts/cluster_embed.py180 print("Error: scanpy required. Install with: pip install scanpy")
LOW…h/skills/scvi-tools/scripts/differential_expression.py77 except Exception as e:
MEDIUM…h/skills/scvi-tools/scripts/differential_expression.py181 print("Error: scvi-tools and scanpy required")
MEDIUMbio-research/skills/scvi-tools/scripts/train_model.py273 print("Error: --labels-key required for scanvi model")
MEDIUMbio-research/skills/scvi-tools/scripts/train_model.py280 print("Error: scvi-tools and scanpy required")
MEDIUMbio-research/skills/scvi-tools/scripts/train_model.py296 print("Error: mudata required for .h5mu files. Install with: pip install mudata")
LOWbio-research/skills/scvi-tools/scripts/train_model.py361 except Exception as e:
MEDIUMbio-research/skills/scvi-tools/scripts/prepare_data.py143 print("Error: scanpy required. Install with: pip install scanpy")
MEDIUM…search/skills/scvi-tools/scripts/integrate_datasets.py193 print("Error: scvi-tools and scanpy required")
MEDIUM…-research/skills/scvi-tools/scripts/transfer_labels.py166 print("Error: scvi-tools and scanpy required")
MEDIUM…-research/skills/scvi-tools/scripts/transfer_labels.py188 print("Error: Model was saved without adata. Please provide --reference-adata")
LOW…s/nextflow-development/scripts/generate_samplesheet.py363 except Exception as e:
MEDIUM…s/nextflow-development/scripts/generate_samplesheet.py424 print(f"Error: Not a directory: {args.input}")
MEDIUM…s/nextflow-development/scripts/generate_samplesheet.py447 print(f"Error: {e}")
LOW…ills/nextflow-development/scripts/check_environment.py105 except Exception as e:
LOW…ills/nextflow-development/scripts/check_environment.py172 except Exception as e:
LOW…ills/nextflow-development/scripts/check_environment.py230 except Exception as e:
LOW…ills/nextflow-development/scripts/check_environment.py263 except Exception:
LOW…ills/nextflow-development/scripts/check_environment.py271 except Exception:
LOW…ills/nextflow-development/scripts/check_environment.py301 except Exception as e:
LOW…ills/nextflow-development/scripts/check_environment.py322 except Exception:
LOW…ills/nextflow-development/scripts/check_environment.py330 except Exception:
LOW…ills/nextflow-development/scripts/check_environment.py354 except Exception as e:
LOW…kills/nextflow-development/scripts/detect_data_type.py74 except Exception:
MEDIUM…kills/nextflow-development/scripts/detect_data_type.py288 print(f"Error: {e}")
LOW…kills/nextflow-development/scripts/detect_data_type.py291 except Exception as e:
MEDIUM…kills/nextflow-development/scripts/detect_data_type.py295 print(f"Error: {e}")
LOW…h/skills/nextflow-development/scripts/sra_geo_fetch.py93 except Exception:
MEDIUM…/skills/nextflow-development/scripts/manage_genomes.py509 print(f"Error: {params['error']}")
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py74 except Exception as e:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py139 except Exception as e:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py192 except Exception as e:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py293 except Exception as e:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py348 except Exception as e:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py394 except Exception as e:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py466 except Exception as e:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py560 except Exception as e:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py693 except Exception as e:
LOW…-data-to-allotrope/references/supported_instruments.md149except Exception as e:
MEDIUM…ls/instrument-data-to-allotrope/scripts/flatten_asm.py222 print(f"Error: File not found: {args.input}")
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py1066 except Exception as e:
LOW…/instrument-data-to-allotrope/scripts/export_parser.py79 except Exception as e:
MEDIUM…/instrument-data-to-allotrope/scripts/export_parser.py142 print(f"Error: File not found: {{args.input}}")
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py128 except Exception as e:
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py190 except Exception as e:
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py207 except Exception:
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py216 except Exception:
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py224 except Exception:
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py297 except Exception as e:
MEDIUM…instrument-data-to-allotrope/scripts/convert_to_asm.py408 print(f"Error: File not found: {args.input}")
MEDIUM…instrument-data-to-allotrope/scripts/convert_to_asm.py468 print("Error: Could not convert file")
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py527 except Exception as e:
MEDIUM…instrument-data-to-allotrope/scripts/convert_to_asm.py23def get_allotropy():
4 more matches not shown…
Unused Imports39 hits · 38 pts
SeverityFileLineSnippet
LOW…-research/skills/single-cell-rna-qc/scripts/qc_core.py10
LOWbio-research/skills/scvi-tools/scripts/model_utils.py11
LOW…h/skills/scvi-tools/scripts/differential_expression.py14
LOWbio-research/skills/scvi-tools/scripts/prepare_data.py54
LOW…search/skills/scvi-tools/scripts/integrate_datasets.py49
LOW…-research/skills/scvi-tools/scripts/transfer_labels.py42
LOW…kills/nextflow-development/scripts/detect_data_type.py18
LOW…h/skills/nextflow-development/scripts/sra_geo_fetch.py23
LOW…h/skills/nextflow-development/scripts/sra_geo_fetch.py25
LOW…h/skills/nextflow-development/scripts/sra_geo_fetch.py28
LOW…h/skills/nextflow-development/scripts/sra_geo_fetch.py30
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py12
LOW…/skills/nextflow-development/scripts/utils/__init__.py29
LOW…/skills/nextflow-development/scripts/utils/__init__.py29
LOW…/skills/nextflow-development/scripts/utils/__init__.py29
LOW…/skills/nextflow-development/scripts/utils/__init__.py32
LOW…/skills/nextflow-development/scripts/utils/__init__.py32
LOW…/skills/nextflow-development/scripts/utils/__init__.py32
LOW…/skills/nextflow-development/scripts/utils/__init__.py32
LOW…/skills/nextflow-development/scripts/utils/__init__.py40
LOW…/skills/nextflow-development/scripts/utils/__init__.py40
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py16
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py16
LOW…ls/instrument-data-to-allotrope/scripts/flatten_asm.py14
LOW…ls/instrument-data-to-allotrope/scripts/flatten_asm.py16
LOW…ls/instrument-data-to-allotrope/scripts/flatten_asm.py17
LOW…/instrument-data-to-allotrope/scripts/export_parser.py17
Hyper-Verbose Identifiers33 hits · 34 pts
SeverityFileLineSnippet
LOW…earch/skills/single-cell-rna-qc/scripts/qc_plotting.py108def plot_filtering_thresholds(adata, outlier_masks, thresholds, output_path):
LOW…s/nextflow-development/scripts/generate_samplesheet.py352def validate_existing_samplesheet(csv_path: str, pipeline: str) -> ValidationResult:
LOW…kills/nextflow-development/scripts/detect_data_type.py23def load_all_pipeline_configs() -> Dict[str, Dict]:
LOW…kills/nextflow-development/scripts/detect_data_type.py80def calculate_pipeline_scores(scan_info: Dict, configs: Dict) -> Dict[str, Dict]:
LOW…nextflow-development/scripts/utils/sample_inference.py131def infer_tumor_normal_status(sample_name: str) -> Optional[int]:
LOW…kills/nextflow-development/scripts/utils/validators.py208def _validate_atacseq_specific(
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py144def fetch_sra_study_accession(geo_id: str) -> Optional[str]:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py502def fetch_bioproject_from_geo(geo_id: str) -> Optional[str]:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py565def fetch_sra_run_info_detailed(geo_id: str, bioproject: Optional[str] = None) -> List[Dict]:
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py789def format_sample_groups_table(groups: Dict[str, Dict]) -> str:
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py484def validate_naming_conventions(content_str: str, result: ValidationResult):
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py665def validate_unique_identifiers(content_str: str, result: ValidationResult):
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py714def validate_nested_document_structure(
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py745 def find_flattened_fields_in_measurements(obj, path=""):
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py848def validate_liquid_handler_structure(
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py195def get_deterministic_timestamp(filepath: str) -> str:
LOW…t/zoom-plugin/skills/rtms/examples/manual-websocket.md440function subscribeToParticipantVideo(streamId, userId) {
LOW…ner-built/zoom-plugin/skills/rtms/examples/rtms-bot.md313async function connectSignalingWithRetry(signalingUrl, sessionKey) {
LOW…ilt/zoom-plugin/skills/rtms/concepts/lifecycle-flow.md373function subscribeToParticipantVideo(streamId, userId) {
LOW…ral/use-cases/retrieve-meeting-and-subscribe-events.md810async function getMeetingParticipantsReport(meetingId) {
LOW…in/skills/general/use-cases/recording-transcription.md230async function downloadPendingRecordings() {
LOW…/skills/general/use-cases/user-and-meeting-creation.md435async function provisionUserWithMeetingSafe(userInfo, meetingInfo) {
LOW…zoom-plugin/skills/team-chat/examples/chatbot-setup.md100function verifyZoomWebhookSignature(req) {
LOW…uilt/zoom-plugin/skills/team-chat/concepts/webhooks.md97function verifyZoomWebhookSignature(req) {
LOW…/skills/video-sdk/web/troubleshooting/common-issues.md72async function renderExistingParticipants() {
LOW…lugin/skills/video-sdk/web/examples/video-rendering.md87async function renderExistingParticipants() {
LOW…/skills/video-sdk/web/examples/session-join-pattern.md179async function renderExistingParticipants() {
LOW…lugin/skills/video-sdk/web/examples/command-channel.md81async function joinAndSetupCommandChannel(topic, jwt, userName) {
LOW…lls/video-sdk/web/concepts/sdk-architecture-pattern.md187async function renderExistingParticipants() {
LOW…ls/probe-sdk/examples/comprehensive-network-pattern.md8export async function runComprehensiveDiagnostic() {
LOW…oom-plugin/skills/webhooks/references/subscriptions.md195async function updateWebhookSubscription(accessToken, events) {
LOWproductivity/skills/dashboard.html2049 function startEditingListSectionTitle(titleEl, section) {
LOWproductivity/skills/dashboard.html2817 function renderMemoryDirectoryFlat(dirName, files) {
Cross-Language Confusion9 hits · 30 pts
SeverityFileLineSnippet
HIGH…ills/nextflow-development/scripts/check_environment.py73 fix="sudo usermod -aG docker $USER && newgrp docker"
HIGH…ills/nextflow-development/scripts/check_environment.py120 fix="curl -s https://get.nextflow.io | bash && mv nextflow ~/bin/ && export PATH=$HOME/bin:$PATH"
HIGH…/instrument-data-to-allotrope/scripts/export_parser.py193 "execution_count": null,
HIGH…/instrument-data-to-allotrope/scripts/export_parser.py202 "execution_count": null,
HIGH…/instrument-data-to-allotrope/scripts/export_parser.py224 "execution_count": null,
HIGH…/instrument-data-to-allotrope/scripts/export_parser.py242 "execution_count": null,
HIGH…/instrument-data-to-allotrope/scripts/export_parser.py264 "execution_count": null,
HIGH…/instrument-data-to-allotrope/scripts/export_parser.py280 "execution_count": null,
HIGH…/instrument-data-to-allotrope/scripts/export_parser.py325 "execution_count": null,
Deep Nesting31 hits · 30 pts
SeverityFileLineSnippet
LOW…-research/skills/single-cell-rna-qc/scripts/qc_core.py104
LOW…o-research/skills/scvi-tools/scripts/validate_adata.py83
LOWbio-research/skills/scvi-tools/scripts/model_utils.py566
LOWbio-research/skills/scvi-tools/scripts/cluster_embed.py83
LOWbio-research/skills/scvi-tools/scripts/train_model.py232
LOW…s/nextflow-development/scripts/generate_samplesheet.py283
LOW…s/nextflow-development/scripts/generate_samplesheet.py373
LOW…ills/nextflow-development/scripts/check_environment.py47
LOW…ills/nextflow-development/scripts/check_environment.py238
LOW…kills/nextflow-development/scripts/detect_data_type.py37
LOW…kills/nextflow-development/scripts/detect_data_type.py80
LOW…h/skills/nextflow-development/scripts/sra_geo_fetch.py396
LOW…h/skills/nextflow-development/scripts/sra_geo_fetch.py557
LOW…/skills/nextflow-development/scripts/manage_genomes.py418
LOW…s/nextflow-development/scripts/utils/file_discovery.py42
LOW…kills/nextflow-development/scripts/utils/validators.py57
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py49
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py197
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py298
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py353
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py399
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py502
LOW…kills/nextflow-development/scripts/utils/ncbi_utils.py565
LOW…ls/instrument-data-to-allotrope/scripts/flatten_asm.py86
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py714
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py745
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py101
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py263
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py302
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py371
LOW…s/data-context-extractor/scripts/package_data_skill.py44
Magic Placeholder Names4 hits · 20 pts
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HIGH…n/skills/meeting-sdk/web/concepts/sharedarraybuffer.md94<meta http-equiv="origin-trial" content="YOUR_TOKEN_HERE" />
HIGH…in/skills/general/use-cases/transcription-bot-linux.md328ASSEMBLYAI_API_KEY=your_api_key
HIGH…tual-agent/web/examples/campaign-and-entry-patterns.md6<script data-apikey="YOUR_API_KEY" src="https://us01ccistatic.zoom.us/us01cci/web-sdk/zcc-sdk.js"></script>
HIGH…tual-agent/web/examples/campaign-and-entry-patterns.md22 apikey: 'YOUR_API_KEY',
Redundant / Tautological Comments13 hits · 20 pts
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LOWbio-research/skills/scvi-tools/scripts/train_model.py142 # Check if data needs preprocessing
LOWbio-research/skills/scvi-tools/scripts/train_model.py187 # Check if this is MuData
LOW…kills/nextflow-development/scripts/detect_data_type.py191 # Check if any sequencing files found
LOW…/skills/nextflow-development/scripts/manage_genomes.py376 # Check if installed locally
LOW…kills/nextflow-development/scripts/utils/validators.py107 # Check if there's a default
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py458 # Check if technique is in known list (soft validation)
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py466 # Check if technique seems appropriate for content
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py651 # Check if field appears in measurement document context but not in calculated data
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py727 # Check if proper nested documents exist
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py750 # Check if we're inside a measurement document
LOW…s/instrument-data-to-allotrope/scripts/validate_asm.py768 # Check if this key should be nested but isn't
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py115 # Read file content if not provided
LOW…instrument-data-to-allotrope/scripts/convert_to_asm.py283 # Read file based on extension
Fake / Example Data17 hits · 18 pts
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LOWpartner-built/zoom-plugin/skills/ui-toolkit/SKILL.md85 userName: "John Doe",
LOW…t/zoom-plugin/skills/meeting-sdk/web/references/web.md247 userEmail: 'user@example.com',
LOW…ral/use-cases/retrieve-meeting-and-subscribe-events.md628joinMeeting('123456789', 'John Doe');
LOW…/skills/general/use-cases/user-and-meeting-creation.md422// user: { id: 'abc123', email: 'newuser@example.com', name: 'John Doe' },
LOW…zoom-plugin/skills/general/use-cases/embed-meetings.md86 userName: 'John Doe',
LOW…zoom-plugin/skills/general/use-cases/embed-meetings.md111 userName: 'John Doe',
LOW…om-plugin/skills/team-chat/references/message-cards.md145 { "key": "Assignee", "value": "John Doe" }
LOW…uilt/zoom-plugin/skills/team-chat/concepts/webhooks.md266 "userName": "John Doe",
LOW…uilt/zoom-plugin/skills/team-chat/concepts/webhooks.md315 "userName": "John Doe"
LOW…-plugin/skills/zoom-apps-sdk/examples/layers-camera.md113 ctx.fillText('Acme Corp', 20, 695);
LOW…ilt/zoom-plugin/skills/websockets/references/events.md152 "user_name": "John Doe",
LOW…ilt/zoom-plugin/skills/websockets/references/events.md175 "user_name": "John Doe",
LOW…ilt/zoom-plugin/skills/websockets/references/events.md198 "user_name": "John Doe"
LOW…ilt/zoom-plugin/skills/websockets/references/events.md223 "user_name": "John Doe"
LOWpartner-built/zoom-plugin/skills/cobrowse-sdk/SKILL.md189 "userName": "John Doe"
LOW…r-built/zoom-plugin/skills/cobrowse-sdk/get-started.md141 "userName": "John Doe"
LOW…uilt/zoom-plugin/skills/rest-api/references/reports.md71 "user_email": "user@example.com",
Over-Commented Block15 hits · 15 pts
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LOW…h/skills/instrument-data-to-allotrope/requirements.txt1# Instrument Data to Allotrope Skill - Pinned Dependencies
LOW…h/skills/instrument-data-to-allotrope/requirements.txt21# PDF parsing support (for instruments that export PDFs)
LOW…oom-plugin/skills/meeting-sdk/web/client-view/SKILL.md221## Event Listeners
LOW…ls/meeting-sdk/windows/troubleshooting/build-errors.md41- All `.h` files that include SDK headers
LOW…ls/meeting-sdk/windows/troubleshooting/build-errors.md241
LOW…ting-sdk/windows/examples/custom-ui-video-rendering.md201## Complete Event Listener Implementations
LOW…in/skills/general/references/authorization-patterns.md121 }
LOW…n/skills/video-sdk/linux/references/linux-reference.md781#include "helpers/zoom_video_sdk_video_helper_interface.h"
LOW…ills/video-sdk/windows/references/windows-reference.md1181// Core headers
LOW…lls/video-sdk/windows/examples/session-join-pattern.md21#include <windows.h>
LOW.github/workflows/revert-failed-bumps.yml1name: Revert Failed Bumps
LOW.github/workflows/check-mcp-urls.yml1name: Check MCP URLs
LOW.github/workflows/scan-plugins.yml1name: Scan Plugins
LOW.github/workflows/scan-plugins.yml81 # Federation (anthropic-federation-rule-id input) — the IDs are literal
LOW.github/workflows/bump-plugin-shas.yml1name: Bump Plugin SHAs
Synthetic Comment Markers3 hits · 14 pts
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HIGH…/instrument-data-to-allotrope/scripts/export_parser.py25Auto-generated by Claude instrument-data-to-allotrope skill
HIGH…/instrument-data-to-allotrope/scripts/export_parser.py184 "Auto-generated by Claude instrument-data-to-allotrope skill\\n",
HIGH…n/skills/general/use-cases/ai-companion-integration.md345// Archive all AI-generated content
Self-Referential Comments2 hits · 6 pts
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MEDIUM…kills/nextflow-development/scripts/utils/ncbi_utils.py636 # Define the fixed column order for SRA runinfo format
MEDIUM…s/data-context-extractor/scripts/package_data_skill.py84 # Create the zip file
AI Slop Vocabulary1 hit · 1 pts
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MEDIUM…ills/nextflow-development/scripts/check_environment.py364 """Run all environment checks and return comprehensive report."""