A general purpose scientific writer
This report presents the forensic synthetic code analysis of K-Dense-AI/claude-scientific-writer, a Python project with 2,097 GitHub stars. SynthScan v2.0 examined 367,791 lines of code across 856 source files, recording 3604 pattern matches distributed across 20 syntactic categories. The overall adjusted score of 28.0 places this repository in the Moderate AI signal band.
The scanner applied 160+ deterministic lexical heuristics, multi-line block detectors, abstract syntax tree depth profilers, and a cross-file Jaccard similarity matrix to construct a statistically normalised synthetic code estimate. All matches are individually weighted by severity coefficient and contextual multiplier before summation, and the resulting headline score is temporally discounted to account for the repository's development history relative to the commercial emergence of large language model coding tooling (November 2022 onward).
This chart maps the temporal evolution of the adjusted synthetic code score across successive scan runs. An upward trajectory indicates ongoing incorporation of AI-generated code or expanding LLM-assisted scaffolding; a stable or declining trajectory may reflect active human refactoring, code removal, or the adoption of stricter authorship policies. The dashed secondary line (right axis) independently tracks total raw pattern hit count, which can diverge from the normalised score when codebase size changes significantly between scans.
Classifies detected patterns by their diagnostic confidence and structural impact. CRITICAL patterns (coefficient 10) represent definitive synthetic signatures — hallucinated imports, explicit LLM attribution metadata — virtually never produced by human authors. HIGH (5) indicates strong structural tells such as cross-file repetition or cross-linguistic idioms. MEDIUM (2) covers recognisable conversational padding and AI-specific vocabulary. LOW (1) captures subtle indicators like tautological comments and generic boilerplate that require density to carry independent signal.
This horizontal bar chart decomposes the repository's raw synthetic code score by top-level directory, allowing you to pinpoint precisely which modules or components carry the highest AI authorship density. Directories with disproportionately high scores relative to their size warrant targeted manual review: concentrated AI signatures often trace back to mass-generated configuration layers, auto-ported test suites, LLM-scaffolded boilerplate classes, or entire subsystems authored under heavy copilot assistance. Use this view to prioritise your human code-review effort.
The scanner identified 3604 distinct pattern matches across 20 syntactic categories. Each entry below represents a discrete location in the source code where the engine recorded a statistically significant AI authorship indicator. Expand any category row to inspect the individual file paths, line numbers, code snippets, and the lexical context (CODE, COMMENT, or STRING) in which each match was detected.
Reading the findings table: The Severity column indicates the diagnostic confidence level (CRITICAL / HIGH / MEDIUM / LOW). The Context column identifies whether the match occurred inside executable code, an inline comment, or a string literal — comment-context matches receive a ×1.5 weight because LLMs systematically over-annotate. The ⚡ bolt icon marks clustered matches: three or more patterns within a 10-line window, each receiving an additional ×1.5 density multiplier as dense clusters constitute far stronger evidence of synthetic authorship than isolated hits.
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| HIGH | .claude/skills/document-skills/xlsx/recalc.py | 0 | excel formula recalculation script recalculates all formulas in an excel file using libreoffice | STRING |
| HIGH | skills/document-skills/xlsx/recalc.py | 0 | excel formula recalculation script recalculates all formulas in an excel file using libreoffice | STRING |
| HIGH | …c_writer/.claude/skills/document-skills/xlsx/recalc.py | 0 | excel formula recalculation script recalculates all formulas in an excel file using libreoffice | STRING |
| HIGH | .claude/skills/document-skills/xlsx/recalc.py | 0 | setup libreoffice macro for recalculation if not already configured | STRING |
| HIGH | skills/document-skills/xlsx/recalc.py | 0 | setup libreoffice macro for recalculation if not already configured | STRING |
| HIGH | …c_writer/.claude/skills/document-skills/xlsx/recalc.py | 0 | setup libreoffice macro for recalculation if not already configured | STRING |
| HIGH | .claude/skills/document-skills/xlsx/recalc.py | 0 | <?xml version="1.0" encoding="utf-8"?> <!doctype script:module public "-//openoffice.org//dtd officedocument 1.0//en" "m | STRING |
| HIGH | skills/document-skills/xlsx/recalc.py | 0 | <?xml version="1.0" encoding="utf-8"?> <!doctype script:module public "-//openoffice.org//dtd officedocument 1.0//en" "m | STRING |
| HIGH | …c_writer/.claude/skills/document-skills/xlsx/recalc.py | 0 | <?xml version="1.0" encoding="utf-8"?> <!doctype script:module public "-//openoffice.org//dtd officedocument 1.0//en" "m | STRING |
| HIGH | .claude/skills/document-skills/xlsx/recalc.py | 0 | recalculate formulas in excel file and report any errors args: filename: path to excel file timeout: maximum time to wai | STRING |
| HIGH | skills/document-skills/xlsx/recalc.py | 0 | recalculate formulas in excel file and report any errors args: filename: path to excel file timeout: maximum time to wai | STRING |
| HIGH | …c_writer/.claude/skills/document-skills/xlsx/recalc.py | 0 | recalculate formulas in excel file and report any errors args: filename: path to excel file timeout: maximum time to wai | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test intersection between label and entry of the same field | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test intersection between label and entry of the same field | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test intersection between label and entry of the same field | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test intersection between bounding boxes of different fields | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test intersection between bounding boxes of different fields | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test intersection between bounding boxes of different fields | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that boxes on different pages don't count as intersecting | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that boxes on different pages don't count as intersecting | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that boxes on different pages don't count as intersecting | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that entry box height is checked against font size | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that entry box height is checked against font size | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that entry box height is checked against font size | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that default font size is used when not specified | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that default font size is used when not specified | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that default font size is used when not specified | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that missing entry_text doesn't cause height check | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that missing entry_text doesn't cause height check | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that missing entry_text doesn't cause height check | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that error messages are limited to prevent excessive output | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that error messages are limited to prevent excessive output | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that error messages are limited to prevent excessive output | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that boxes touching at edges don't count as intersecting | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that boxes touching at edges don't count as intersecting | STRING |
| HIGH | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 0 | test that boxes touching at edges don't count as intersecting | STRING |
| HIGH | …t-skills/pdf/scripts/fill_pdf_form_with_annotations.py | 0 | transform bounding box from image coordinates to pdf coordinates | STRING |
| HIGH | …t-skills/pdf/scripts/fill_pdf_form_with_annotations.py | 0 | transform bounding box from image coordinates to pdf coordinates | STRING |
| HIGH | …t-skills/pdf/scripts/fill_pdf_form_with_annotations.py | 0 | transform bounding box from image coordinates to pdf coordinates | STRING |
| HIGH | …aude/skills/document-skills/pptx/ooxml/scripts/pack.py | 0 | tool to pack a directory into a .docx, .pptx, or .xlsx file with xml formatting undone. example usage: python pack.py <i | STRING |
| HIGH | …aude/skills/document-skills/docx/ooxml/scripts/pack.py | 0 | tool to pack a directory into a .docx, .pptx, or .xlsx file with xml formatting undone. example usage: python pack.py <i | STRING |
| HIGH | skills/document-skills/pptx/ooxml/scripts/pack.py | 0 | tool to pack a directory into a .docx, .pptx, or .xlsx file with xml formatting undone. example usage: python pack.py <i | STRING |
| HIGH | skills/document-skills/docx/ooxml/scripts/pack.py | 0 | tool to pack a directory into a .docx, .pptx, or .xlsx file with xml formatting undone. example usage: python pack.py <i | STRING |
| HIGH | …aude/skills/document-skills/pptx/ooxml/scripts/pack.py | 0 | tool to pack a directory into a .docx, .pptx, or .xlsx file with xml formatting undone. example usage: python pack.py <i | STRING |
| HIGH | …aude/skills/document-skills/docx/ooxml/scripts/pack.py | 0 | tool to pack a directory into a .docx, .pptx, or .xlsx file with xml formatting undone. example usage: python pack.py <i | STRING |
| HIGH | …aude/skills/document-skills/pptx/ooxml/scripts/pack.py | 0 | pack a directory into an office file (.docx/.pptx/.xlsx). args: input_dir: path to unpacked office document directory ou | STRING |
| HIGH | …aude/skills/document-skills/docx/ooxml/scripts/pack.py | 0 | pack a directory into an office file (.docx/.pptx/.xlsx). args: input_dir: path to unpacked office document directory ou | STRING |
| HIGH | skills/document-skills/pptx/ooxml/scripts/pack.py | 0 | pack a directory into an office file (.docx/.pptx/.xlsx). args: input_dir: path to unpacked office document directory ou | STRING |
| HIGH | skills/document-skills/docx/ooxml/scripts/pack.py | 0 | pack a directory into an office file (.docx/.pptx/.xlsx). args: input_dir: path to unpacked office document directory ou | STRING |
| HIGH | …aude/skills/document-skills/pptx/ooxml/scripts/pack.py | 0 | pack a directory into an office file (.docx/.pptx/.xlsx). args: input_dir: path to unpacked office document directory ou | STRING |
| HIGH | …aude/skills/document-skills/docx/ooxml/scripts/pack.py | 0 | pack a directory into an office file (.docx/.pptx/.xlsx). args: input_dir: path to unpacked office document directory ou | STRING |
| HIGH | …aude/skills/document-skills/pptx/ooxml/scripts/pack.py | 0 | validate document by converting to html with soffice. | STRING |
| HIGH | …aude/skills/document-skills/docx/ooxml/scripts/pack.py | 0 | validate document by converting to html with soffice. | STRING |
| HIGH | skills/document-skills/pptx/ooxml/scripts/pack.py | 0 | validate document by converting to html with soffice. | STRING |
| HIGH | skills/document-skills/docx/ooxml/scripts/pack.py | 0 | validate document by converting to html with soffice. | STRING |
| HIGH | …aude/skills/document-skills/pptx/ooxml/scripts/pack.py | 0 | validate document by converting to html with soffice. | STRING |
| HIGH | …aude/skills/document-skills/docx/ooxml/scripts/pack.py | 0 | validate document by converting to html with soffice. | STRING |
| HIGH | …/skills/document-skills/pptx/ooxml/scripts/validate.py | 0 | command line tool to validate office document xml files against xsd schemas and tracked changes. usage: python validate. | STRING |
| HIGH | …/skills/document-skills/docx/ooxml/scripts/validate.py | 0 | command line tool to validate office document xml files against xsd schemas and tracked changes. usage: python validate. | STRING |
| HIGH | skills/document-skills/pptx/ooxml/scripts/validate.py | 0 | command line tool to validate office document xml files against xsd schemas and tracked changes. usage: python validate. | STRING |
| 1296 more matches not shown… | ||||
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| MEDIUM | example_api_usage.py | 114 | print("Error Handling Example") | CODE |
| LOW | example_api_usage.py | 141 | except Exception as e: | CODE |
| LOW | .claude/skills/document-skills/xlsx/recalc.py | 49 | except Exception: | CODE |
| LOW | .claude/skills/document-skills/xlsx/recalc.py | 154 | except Exception as e: | CODE |
| LOW | .claude/skills/document-skills/pdf/reference.md | 484 | except Exception as e: | CODE |
| LOW | .claude/skills/document-skills/pdf/reference.md | 504 | except Exception as e: | CODE |
| LOW | .claude/skills/document-skills/pdf/reference.md | 578 | except Exception as e: | CODE |
| LOW | …aude/skills/document-skills/pptx/ooxml/scripts/pack.py | 128 | except Exception as e: | CODE |
| MEDIUM | …/skills/document-skills/pptx/ooxml/scripts/validate.py | 52 | print(f"Error: Validation not supported for file type {file_extension}") | CODE |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 187 | except Exception as e: | CODE |
| MEDIUM⚡ | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 188 | print(f"Error counting paragraphs in unpacked document: {e}") | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 211 | except Exception as e: | CODE |
| MEDIUM | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 212 | print(f"Error counting paragraphs in original document: {e}") | CODE |
| LOW | …ment-skills/pptx/ooxml/scripts/validation/redlining.py | 59 | except Exception: | CODE |
| LOW | …ment-skills/pptx/ooxml/scripts/validation/redlining.py | 71 | except Exception as e: | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 228 | except Exception as e: | CODE |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 471 | except Exception as e: | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 140 | except Exception as e: | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 359 | except Exception as e: | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 604 | except Exception: | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 626 | except Exception as e: | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 866 | except Exception as e: | CODE |
| MEDIUM | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 100 | print(f"Error: Invalid PowerPoint file: {args.input}") | CODE |
| MEDIUM | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 124 | print("Error: No slides found") | CODE |
| LOW⚡ | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 144 | except Exception as e: | CODE |
| MEDIUM⚡ | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 145 | print(f"Error: {e}") | CODE |
| LOW | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 351 | except Exception: | CODE |
| MEDIUM⚡ | …laude/skills/document-skills/pptx/scripts/rearrange.py | 58 | print(f"Error: Template file not found: {args.template}") | STRING |
| MEDIUM⚡ | …laude/skills/document-skills/pptx/scripts/rearrange.py | 68 | print(f"Error: {e}") | STRING |
| LOW⚡ | …laude/skills/document-skills/pptx/scripts/rearrange.py | 70 | except Exception as e: | STRING |
| MEDIUM⚡ | …laude/skills/document-skills/pptx/scripts/rearrange.py | 71 | print(f"Error processing presentation: {e}") | STRING |
| LOW | …laude/skills/document-skills/pptx/scripts/rearrange.py | 124 | except Exception: | CODE |
| MEDIUM | …laude/skills/document-skills/pptx/scripts/inventory.py | 84 | print(f"Error: Input file not found: {args.input}") | STRING |
| MEDIUM | …laude/skills/document-skills/pptx/scripts/inventory.py | 88 | print("Error: Input must be a PowerPoint file (.pptx)") | STRING |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 120 | except Exception as e: | STRING |
| MEDIUM | …laude/skills/document-skills/pptx/scripts/inventory.py | 121 | print(f"Error processing presentation: {e}") | STRING |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 384 | except Exception: | CODE |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 504 | except Exception: | CODE |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 601 | except Exception: | CODE |
| MEDIUM⚡ | .claude/skills/document-skills/pptx/scripts/replace.py | 367 | print(f"Error: Input file '{input_pptx}' not found") | CODE |
| MEDIUM⚡ | .claude/skills/document-skills/pptx/scripts/replace.py | 371 | print(f"Error: Replacements JSON file '{replacements_json}' not found") | CODE |
| LOW⚡ | .claude/skills/document-skills/pptx/scripts/replace.py | 376 | except Exception as e: | CODE |
| MEDIUM⚡ | .claude/skills/document-skills/pptx/scripts/replace.py | 377 | print(f"Error applying replacements: {e}") | CODE |
| LOW | …aude/skills/document-skills/docx/ooxml/scripts/pack.py | 128 | except Exception as e: | CODE |
| MEDIUM | …/skills/document-skills/docx/ooxml/scripts/validate.py | 52 | print(f"Error: Validation not supported for file type {file_extension}") | CODE |
| LOW⚡ | …/document-skills/docx/ooxml/scripts/validation/docx.py | 187 | except Exception as e: | CODE |
| MEDIUM⚡ | …/document-skills/docx/ooxml/scripts/validation/docx.py | 188 | print(f"Error counting paragraphs in unpacked document: {e}") | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/docx.py | 211 | except Exception as e: | CODE |
| MEDIUM | …/document-skills/docx/ooxml/scripts/validation/docx.py | 212 | print(f"Error counting paragraphs in original document: {e}") | CODE |
| LOW | …ment-skills/docx/ooxml/scripts/validation/redlining.py | 59 | except Exception: | CODE |
| LOW | …ment-skills/docx/ooxml/scripts/validation/redlining.py | 71 | except Exception as e: | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/pptx.py | 228 | except Exception as e: | CODE |
| LOW⚡ | …/document-skills/docx/ooxml/scripts/validation/base.py | 471 | except Exception as e: | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 140 | except Exception as e: | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 359 | except Exception as e: | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 604 | except Exception: | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 626 | except Exception as e: | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 866 | except Exception as e: | CODE |
| LOW | .claude/skills/research-lookup/research_lookup.py | 175 | except Exception as e: | CODE |
| LOW | .claude/skills/research-lookup/research_lookup.py | 217 | except Exception: | CODE |
| 680 more matches not shown… | ||||
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW⚡ | TESTING_INSTRUCTIONS.md | 14 | ### Step 1: Add the Test Marketplace | COMMENT |
| LOW⚡ | TESTING_INSTRUCTIONS.md | 24 | ### Step 2: List Available Plugins | COMMENT |
| LOW⚡ | TESTING_INSTRUCTIONS.md | 32 | ### Step 3: Install the Plugin | COMMENT |
| LOW⚡ | TESTING_INSTRUCTIONS.md | 40 | ### Step 4: Restart Claude Code (if prompted) | COMMENT |
| LOW⚡ | TESTING_INSTRUCTIONS.md | 44 | ### Step 5: Open the Test Project | COMMENT |
| LOW⚡ | TESTING_INSTRUCTIONS.md | 53 | ### Step 6: Run the Init Command | COMMENT |
| LOW | TESTING_INSTRUCTIONS.md | 67 | ### Step 7: Verify Skills Are Available | COMMENT |
| LOW | TESTING_INSTRUCTIONS.md | 84 | ### Step 8: Test Basic Functionality | COMMENT |
| LOW | TESTING_INSTRUCTIONS.md | 97 | ### Step 9: Verify CLAUDE.md Content | COMMENT |
| LOW⚡ | CHANGELOG.md | 962 | # Step 1: Identify topics | COMMENT |
| LOW⚡ | CHANGELOG.md | 966 | # Step 2: Review/edit topics.txt manually | COMMENT |
| LOW⚡ | CHANGELOG.md | 968 | # Step 3: Research in parallel | COMMENT |
| LOW | .claude/skills/document-skills/pdf/forms.md | 85 | ## Step 1: Visual Analysis (REQUIRED) | COMMENT |
| LOW | .claude/skills/document-skills/pdf/forms.md | 130 | ### Step 2: Create fields.json and validation images (REQUIRED) | COMMENT |
| LOW | .claude/skills/document-skills/pdf/forms.md | 184 | ### Step 3: Validate Bounding Boxes (REQUIRED) | COMMENT |
| LOW | .claude/skills/document-skills/pdf/forms.md | 203 | ### Step 4: Add annotations to the PDF | COMMENT |
| LOW | …laude/skills/document-skills/pptx/scripts/rearrange.py | 176 | # Step 1: DUPLICATE repeated slides | COMMENT |
| LOW⚡ | …laude/skills/document-skills/pptx/scripts/rearrange.py | 200 | # Step 2: DELETE unwanted slides (work backwards) | COMMENT |
| LOW⚡ | …laude/skills/document-skills/pptx/scripts/rearrange.py | 209 | # Step 3: REORDER to final sequence | COMMENT |
| LOW | .claude/skills/paper-2-web/references/usage_examples.md | 14 | # Step 1: Organize paper files | COMMENT |
| LOW | .claude/skills/paper-2-web/references/usage_examples.md | 21 | # Step 2: Generate all components | COMMENT |
| LOW | .claude/skills/paper-2-web/references/usage_examples.md | 33 | # Step 3: Review outputs | COMMENT |
| LOW⚡ | …ude/skills/parallel-web/references/workflow_recipes.md | 367 | # Step 1: Significance and burden of disease | COMMENT |
| LOW⚡ | …ude/skills/parallel-web/references/workflow_recipes.md | 376 | # Step 2: Innovation landscape | COMMENT |
| LOW⚡ | …ude/skills/parallel-web/references/workflow_recipes.md | 385 | # Step 3: Find specific papers for preliminary data context | COMMENT |
| LOW⚡ | …ude/skills/parallel-web/references/workflow_recipes.md | 416 | # Step 1: Find paper with parallel search | COMMENT |
| LOW⚡ | …ude/skills/parallel-web/references/workflow_recipes.md | 419 | # Step 2: Get DOI from results | COMMENT |
| LOW⚡ | …ude/skills/parallel-web/references/workflow_recipes.md | 422 | # Step 3: Convert to BibTeX with citation-management skill | COMMENT |
| LOW⚡ | …ude/skills/parallel-web/references/workflow_recipes.md | 429 | # Step 1: Research a process | COMMENT |
| LOW⚡ | …ude/skills/parallel-web/references/workflow_recipes.md | 432 | # Step 2: Use the research to inform a schematic | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 30 | # Step 1: Deep research for comprehensive background | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 35 | # Step 2: Targeted search for specific citations | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 49 | # Step 1: Deep background research | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 58 | # Step 2: Find specific papers to cite | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 100 | # Step 1: Find the paper | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 107 | # Step 2: Extract full metadata from the paper's page | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 230 | # Step 1: Search for recent data on each company | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 238 | # Step 2: Extract from company pages | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 249 | # Step 3: Deep research for synthesis | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 275 | # Step 1: Search for corroborating sources | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 282 | # Step 2: Extract specific figures from top sources | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 308 | # Step 1: Find the latest news | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 316 | # Step 2: Synthesize into a briefing | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 337 | # Step 1: Find documentation pages | COMMENT |
| LOW | …ude/skills/parallel-web/references/workflow_recipes.md | 344 | # Step 2: Extract full content from documentation pages | COMMENT |
| LOW | .claude/skills/parallel-web/references/deep-research.md | 9 | ## Step 1: Start the research | COMMENT |
| LOW | .claude/skills/parallel-web/references/deep-research.md | 42 | ## Step 2: Poll for results | COMMENT |
| LOW | …aude/skills/parallel-web/references/data-enrichment.md | 9 | ## Step 1: Start the enrichment | COMMENT |
| LOW | …aude/skills/parallel-web/references/data-enrichment.md | 41 | ## Step 2: Poll for results | COMMENT |
| LOW | .claude/skills/citation-management/SKILL.md | 219 | #### Step 1: Scan for Incomplete Entries | COMMENT |
| LOW | .claude/skills/citation-management/SKILL.md | 234 | #### Step 2: Web Search for Missing Metadata | COMMENT |
| LOW | .claude/skills/citation-management/SKILL.md | 267 | #### Step 3: Update BibTeX Entries | COMMENT |
| LOW | .claude/skills/citation-management/SKILL.md | 279 | #### Step 4: Handle Unfindable Metadata | COMMENT |
| LOW | .claude/skills/citation-management/SKILL.md | 973 | # Step 1: Find key papers on your topic | COMMENT |
| LOW⚡ | .claude/skills/citation-management/SKILL.md | 984 | # Step 2: Extract metadata from search results | COMMENT |
| LOW⚡ | .claude/skills/citation-management/SKILL.md | 993 | # Step 3: Add specific papers you already know | COMMENT |
| LOW⚡ | .claude/skills/citation-management/SKILL.md | 997 | # Step 4: Combine all BibTeX files | COMMENT |
| LOW⚡ | .claude/skills/citation-management/SKILL.md | 1000 | # Step 5: Format and deduplicate | COMMENT |
| LOW⚡ | .claude/skills/citation-management/SKILL.md | 1007 | # Step 6: Validate | COMMENT |
| LOW⚡ | .claude/skills/citation-management/SKILL.md | 1013 | # Step 7: Review any issues | COMMENT |
| 268 more matches not shown… | ||||
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| MEDIUM | .claude/skills/research-lookup/research_lookup.py | 124 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | .claude/skills/research-lookup/research_lookup.py | 126 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | .claude/skills/research-lookup/research_lookup.py | 242 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | .claude/skills/research-lookup/research_lookup.py | 244 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM⚡ | .claude/skills/research-lookup/research_lookup.py | 336 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM⚡ | .claude/skills/research-lookup/research_lookup.py | 338 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | .claude/skills/research-lookup/research_lookup.py | 374 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | .claude/skills/research-lookup/research_lookup.py | 376 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | .claude/skills/research-lookup/research_lookup.py | 404 | # --------------------------------------------------------------------------- | COMMENT |
| MEDIUM | .claude/skills/research-lookup/research_lookup.py | 406 | # --------------------------------------------------------------------------- | COMMENT |
| MEDIUM | …aude/skills/research-lookup/scripts/research_lookup.py | 124 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | …aude/skills/research-lookup/scripts/research_lookup.py | 126 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | …aude/skills/research-lookup/scripts/research_lookup.py | 242 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | …aude/skills/research-lookup/scripts/research_lookup.py | 244 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM⚡ | …aude/skills/research-lookup/scripts/research_lookup.py | 336 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM⚡ | …aude/skills/research-lookup/scripts/research_lookup.py | 338 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | …aude/skills/research-lookup/scripts/research_lookup.py | 374 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | …aude/skills/research-lookup/scripts/research_lookup.py | 376 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | …aude/skills/research-lookup/scripts/research_lookup.py | 404 | # --------------------------------------------------------------------------- | COMMENT |
| MEDIUM | …aude/skills/research-lookup/scripts/research_lookup.py | 406 | # --------------------------------------------------------------------------- | COMMENT |
| MEDIUM | .claude/skills/parallel-web/scripts/parallel_web.py | 367 | # --------------------------------------------------------------------------- | COMMENT |
| MEDIUM | .claude/skills/parallel-web/scripts/parallel_web.py | 369 | # --------------------------------------------------------------------------- | COMMENT |
| MEDIUM | .claude/skills/poster-presentation/SKILL.md | 144 | # ── Dimensions ──────────────────────────────────────────────────────────────── | COMMENT |
| MEDIUM | .claude/skills/poster-presentation/SKILL.md | 172 | # ── Color Palettes ──────────────────────────────────────────────────────────── | COMMENT |
| MEDIUM | .claude/skills/poster-presentation/SKILL.md | 230 | # ── Drawing helpers ──────────────────────────────────────────────────────────── | COMMENT |
| MEDIUM | .claude/skills/poster-presentation/SKILL.md | 566 | # ── HEADER ────────────────────────────────────────────────────────────── | COMMENT |
| MEDIUM | .claude/skills/poster-presentation/SKILL.md | 571 | # ── LAYOUT CONSTANTS ──────────────────────────────────────────────────── | COMMENT |
| MEDIUM | .claude/skills/poster-presentation/SKILL.md | 584 | # ── COLUMN 1: Abstract + Introduction ─────────────────────────────────── | COMMENT |
| MEDIUM | .claude/skills/poster-presentation/SKILL.md | 601 | # ── COLUMN 2: Methods + Methods Figure ────────────────────────────────── | COMMENT |
| MEDIUM | .claude/skills/poster-presentation/SKILL.md | 621 | # ── COLUMN 3: Results (2 figures) + Conclusions ───────────────────────── | COMMENT |
| MEDIUM | .claude/skills/poster-presentation/SKILL.md | 650 | # ── FOOTER: Acknowledgements + References ─────────────────────────────── | COMMENT |
| MEDIUM | .claude/skills/poster-presentation/SKILL.md | 669 | # ── SAVE ──────────────────────────────────────────────────────────────── | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 46 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 48 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 70 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 72 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 162 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 164 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 210 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 212 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 254 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 256 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 268 | # =========================== | COMMENT |
| MEDIUM | extensions/docx-editor-zotero/word_editor.py | 270 | # =========================== | COMMENT |
| MEDIUM | skills/research-lookup/research_lookup.py | 124 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | skills/research-lookup/research_lookup.py | 126 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | skills/research-lookup/research_lookup.py | 242 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | skills/research-lookup/research_lookup.py | 244 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM⚡ | skills/research-lookup/research_lookup.py | 336 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM⚡ | skills/research-lookup/research_lookup.py | 338 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | skills/research-lookup/research_lookup.py | 374 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | skills/research-lookup/research_lookup.py | 376 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | skills/research-lookup/research_lookup.py | 404 | # --------------------------------------------------------------------------- | COMMENT |
| MEDIUM | skills/research-lookup/research_lookup.py | 406 | # --------------------------------------------------------------------------- | COMMENT |
| MEDIUM | skills/research-lookup/scripts/research_lookup.py | 124 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | skills/research-lookup/scripts/research_lookup.py | 126 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | skills/research-lookup/scripts/research_lookup.py | 242 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM | skills/research-lookup/scripts/research_lookup.py | 244 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM⚡ | skills/research-lookup/scripts/research_lookup.py | 336 | # ------------------------------------------------------------------ | COMMENT |
| MEDIUM⚡ | skills/research-lookup/scripts/research_lookup.py | 338 | # ------------------------------------------------------------------ | COMMENT |
| 48 more matches not shown… | ||||
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW | example_api_usage.py | 17 | CODE | |
| LOW | example_api_usage.py | 111 | CODE | |
| LOW | example_api_usage.py | 145 | CODE | |
| LOW | .claude/skills/document-skills/xlsx/recalc.py | 53 | CODE | |
| LOW | …ls/document-skills/pdf/scripts/fill_fillable_fields.py | 12 | CODE | |
| LOW | …ls/document-skills/pdf/scripts/fill_fillable_fields.py | 59 | CODE | |
| LOW | …document-skills/pdf/scripts/extract_form_field_info.py | 22 | CODE | |
| LOW | …document-skills/pdf/scripts/extract_form_field_info.py | 62 | CODE | |
| LOW | …ls/document-skills/pdf/scripts/check_bounding_boxes.py | 18 | CODE | |
| LOW | …aude/skills/document-skills/pptx/ooxml/scripts/pack.py | 45 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 72 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 124 | CODE | |
| LOW | …ment-skills/pptx/ooxml/scripts/validation/redlining.py | 139 | CODE | |
| LOW | …ment-skills/pptx/ooxml/scripts/validation/redlining.py | 217 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 77 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 128 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 243 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 186 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 277 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 388 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 486 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 522 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 688 | CODE | |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 765 | CODE | |
| LOW | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 67 | CODE | |
| LOW | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 321 | CODE | |
| LOW | …laude/skills/document-skills/pptx/scripts/rearrange.py | 149 | CODE | |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 140 | CODE | |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 280 | CODE | |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 362 | CODE | |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 480 | CODE | |
| LOW | .claude/skills/document-skills/pptx/scripts/replace.py | 143 | CODE | |
| LOW | .claude/skills/document-skills/pptx/scripts/replace.py | 162 | CODE | |
| LOW | .claude/skills/document-skills/pptx/scripts/replace.py | 214 | CODE | |
| LOW | …aude/skills/document-skills/docx/ooxml/scripts/pack.py | 45 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/docx.py | 72 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/docx.py | 124 | CODE | |
| LOW | …ment-skills/docx/ooxml/scripts/validation/redlining.py | 139 | CODE | |
| LOW | …ment-skills/docx/ooxml/scripts/validation/redlining.py | 217 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/pptx.py | 77 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/pptx.py | 128 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/pptx.py | 243 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 186 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 277 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 388 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 486 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 522 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 688 | CODE | |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 765 | CODE | |
| LOW | .claude/skills/document-skills/docx/scripts/document.py | 75 | CODE | |
| LOW | .claude/skills/document-skills/docx/scripts/document.py | 116 | CODE | |
| LOW | .claude/skills/document-skills/docx/scripts/document.py | 264 | CODE | |
| LOW | .claude/skills/document-skills/docx/scripts/document.py | 342 | CODE | |
| LOW | .claude/skills/document-skills/docx/scripts/document.py | 482 | CODE | |
| LOW | .claude/skills/document-skills/docx/scripts/document.py | 988 | CODE | |
| LOW | …laude/skills/document-skills/docx/scripts/utilities.py | 76 | CODE | |
| LOW | .claude/skills/research-lookup/research_lookup.py | 408 | CODE | |
| LOW | .claude/skills/research-lookup/research_lookup.py | 308 | CODE | |
| LOW | …aude/skills/research-lookup/scripts/research_lookup.py | 408 | CODE | |
| LOW | …aude/skills/research-lookup/scripts/research_lookup.py | 308 | CODE | |
| 260 more matches not shown… | ||||
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW⚡ | tests/test_utils.py | 12 | def test_reads_bibliographystyle_from_tex(self, tmp_path): | CODE |
| LOW⚡ | tests/test_utils.py | 17 | def test_reads_biblatex_style_option(self, tmp_path): | CODE |
| LOW⚡ | tests/test_utils.py | 22 | def test_defaults_to_bibtex_without_tex(self): | CODE |
| LOW⚡ | tests/test_utils.py | 25 | def test_defaults_to_bibtex_when_tex_has_no_style(self, tmp_path): | CODE |
| LOW⚡ | tests/test_utils.py | 43 | def test_topic_match_with_search_keyword(self, tmp_path): | CODE |
| LOW⚡ | tests/test_utils.py | 49 | def test_new_paper_request_returns_none(self, tmp_path): | CODE |
| LOW⚡ | tests/test_utils.py | 54 | def test_count_citations_in_bib(tmp_path): | CODE |
| LOW | tests/test_core.py | 16 | def test_copies_claude_dir_when_missing(tmp_path): | CODE |
| LOW | tests/test_core.py | 29 | def test_refreshes_bundled_skills_when_claude_exists(tmp_path): | CODE |
| LOW | tests/test_core.py | 51 | def test_preserves_user_files_when_refreshing(tmp_path): | CODE |
| LOW | tests/test_core.py | 72 | def test_missing_bundle_logs_warning_instead_of_silence(tmp_path, caplog): | CODE |
| LOW | tests/test_models.py | 8 | def test_progress_update_timestamp_is_timezone_aware_utc(): | CODE |
| LOW | tests/test_models.py | 18 | def test_paper_metadata_created_at_is_timezone_aware_utc(): | CODE |
| LOW⚡ | tests/test_api.py | 10 | def test_three_effort_levels_exist(self): | CODE |
| LOW⚡ | tests/test_api.py | 13 | def test_effort_level_model_assignments(self): | CODE |
| LOW⚡ | tests/test_api.py | 18 | def test_no_effort_level_uses_fable(self): | CODE |
| LOW⚡ | tests/test_api.py | 23 | def test_map_is_shared_with_core(self): | CODE |
| LOW⚡ | tests/test_api.py | 30 | def test_build_paper_result_created_at_is_utc(tmp_path): | CODE |
| LOW⚡ | tests/test_cli.py | 8 | def test_help_mentions_current_research_backend(capsys): | CODE |
| LOW⚡ | tests/test_cli.py | 15 | def test_cli_source_has_no_stale_backend_or_blocking_sleep(): | CODE |
| LOW⚡ | tests/test_cli.py | 22 | def test_default_effort_is_medium_opus(self): | CODE |
| LOW⚡ | tests/test_cli.py | 25 | def test_effort_levels_resolve_via_shared_map(self): | CODE |
| LOW⚡ | tests/test_cli.py | 31 | def test_unknown_effort_falls_back_to_medium(self): | CODE |
| LOW | …ls/document-skills/pdf/scripts/fill_fillable_fields.py | 59 | def validation_error_for_field_value(field_info, field_value): | CODE |
| LOW | …document-skills/pdf/scripts/extract_form_field_info.py | 12 | def get_full_annotation_field_id(annotation): | CODE |
| LOW | …ls/document-skills/pdf/scripts/check_bounding_boxes.py | 18 | def get_bounding_box_messages(fields_json_stream) -> list[str]: | CODE |
| LOW | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 38 | def test_label_entry_intersection_same_field(self): | CODE |
| LOW | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 56 | def test_intersection_between_different_fields(self): | CODE |
| LOW | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 80 | def test_different_pages_no_intersection(self): | CODE |
| LOW | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 104 | def test_entry_height_too_small(self): | CODE |
| LOW | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 125 | def test_entry_height_adequate(self): | CODE |
| LOW | …cument-skills/pdf/scripts/check_bounding_boxes_test.py | 183 | def test_multiple_errors_limit(self): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 72 | def validate_whitespace_preservation(self): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 173 | def count_paragraphs_in_unpacked(self): | CODE |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 192 | def count_paragraphs_in_original(self): | CODE |
| LOW | …ment-skills/pptx/ooxml/scripts/validation/redlining.py | 217 | def _remove_sw_tracked_changes(self, root): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 128 | def validate_slide_layout_ids(self): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 203 | def validate_no_duplicate_slide_layouts(self): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 243 | def validate_notes_slide_references(self): | CODE |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 765 | def _clean_ignorable_namespaces(self, xml_doc): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 388 | def validate_all_relationship_ids(self): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 486 | def _get_expected_relationship_type(self, element_name): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 641 | def validate_file_against_xsd(self, xml_file, verbose=False): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 791 | def _remove_ignorable_elements(self, root): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 815 | def _preprocess_for_mc_ignorable(self, xml_doc): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 826 | def _validate_single_file_xsd(self, xml_file, base_path): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 869 | def _get_original_file_errors(self, xml_file): | CODE |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 906 | def _remove_template_tags_from_text_nodes(self, xml_doc): | CODE |
| LOW⚡ | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 149 | def create_hidden_slide_placeholder(size): | CODE |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 639 | def _calculate_slide_overflow(self) -> None: | CODE |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 766 | def collect_shapes_with_absolute_positions( | CODE |
| LOW | .claude/skills/document-skills/pptx/scripts/replace.py | 43 | def apply_paragraph_properties(paragraph, para_data: Dict[str, Any]): | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/docx.py | 72 | def validate_whitespace_preservation(self): | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/docx.py | 173 | def count_paragraphs_in_unpacked(self): | CODE |
| LOW⚡ | …/document-skills/docx/ooxml/scripts/validation/docx.py | 192 | def count_paragraphs_in_original(self): | CODE |
| LOW | …ment-skills/docx/ooxml/scripts/validation/redlining.py | 217 | def _remove_sw_tracked_changes(self, root): | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/pptx.py | 128 | def validate_slide_layout_ids(self): | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/pptx.py | 203 | def validate_no_duplicate_slide_layouts(self): | CODE |
| LOW | …/document-skills/docx/ooxml/scripts/validation/pptx.py | 243 | def validate_notes_slide_references(self): | CODE |
| LOW⚡ | …/document-skills/docx/ooxml/scripts/validation/base.py | 765 | def _clean_ignorable_namespaces(self, xml_doc): | CODE |
| 226 more matches not shown… | ||||
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW | .claude/skills/document-skills/xlsx/recalc.py | 82 | # Check if gtimeout is available on macOS | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 90 | # Check if text starts or ends with whitespace | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 92 | # Check if xml:space="preserve" attribute exists | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 94 | # Check if this is an ID attribute | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 97 | # Check if value looks like a UUID (has the right length and pattern structure) | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 125 | # Check if it's 32 hex-like characters (could include invalid hex chars) | COMMENT |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 449 | # Check if the ID exists | COMMENT |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 456 | # Check if we have type expectations for this element | COMMENT |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 463 | # Check if the actual type matches or contains the expected type | COMMENT |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 759 | # Check if file is in a main content folder and use appropriate schema | COMMENT |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 776 | # Check if attribute is from a namespace other than allowed ones | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 212 | # Check if this element type has ID uniqueness requirements | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 503 | # Check if this might be a compound like "sldMasterId" | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/base.py | 619 | # Check if it's a known media extension that should be declared | COMMENT |
| LOW | …laude/skills/document-skills/pptx/scripts/inventory.py | 873 | # Check if there's meaningful overlap (more than tolerance) | COMMENT |
| LOW | .claude/skills/document-skills/pptx/scripts/replace.py | 173 | # Check if slide exists | COMMENT |
| LOW | .claude/skills/document-skills/pptx/scripts/replace.py | 306 | # Check if any text overflow got worse | COMMENT |
| LOW | …/document-skills/docx/ooxml/scripts/validation/docx.py | 90 | # Check if text starts or ends with whitespace | COMMENT |
| LOW | …/document-skills/docx/ooxml/scripts/validation/docx.py | 92 | # Check if xml:space="preserve" attribute exists | COMMENT |
| LOW | …/document-skills/docx/ooxml/scripts/validation/pptx.py | 94 | # Check if this is an ID attribute | COMMENT |
| LOW | …/document-skills/docx/ooxml/scripts/validation/pptx.py | 97 | # Check if value looks like a UUID (has the right length and pattern structure) | COMMENT |
| LOW | …/document-skills/docx/ooxml/scripts/validation/pptx.py | 125 | # Check if it's 32 hex-like characters (could include invalid hex chars) | COMMENT |
| LOW⚡ | …/document-skills/docx/ooxml/scripts/validation/base.py | 449 | # Check if the ID exists | COMMENT |
| LOW⚡ | …/document-skills/docx/ooxml/scripts/validation/base.py | 456 | # Check if we have type expectations for this element | COMMENT |
| LOW⚡ | …/document-skills/docx/ooxml/scripts/validation/base.py | 463 | # Check if the actual type matches or contains the expected type | COMMENT |
| LOW⚡ | …/document-skills/docx/ooxml/scripts/validation/base.py | 759 | # Check if file is in a main content folder and use appropriate schema | COMMENT |
| LOW⚡ | …/document-skills/docx/ooxml/scripts/validation/base.py | 776 | # Check if attribute is from a namespace other than allowed ones | COMMENT |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 212 | # Check if this element type has ID uniqueness requirements | COMMENT |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 503 | # Check if this might be a compound like "sldMasterId" | COMMENT |
| LOW | …/document-skills/docx/ooxml/scripts/validation/base.py | 619 | # Check if it's a known media extension that should be declared | COMMENT |
| LOW | .claude/skills/document-skills/docx/scripts/document.py | 539 | # Check if it's a numbered list item | COMMENT |
| LOW | .claude/skills/document-skills/docx/scripts/document.py | 1055 | # Check if this rsid already exists | COMMENT |
| LOW | .claude/skills/document-skills/docx/scripts/document.py | 1192 | # Check if author already exists | COMMENT |
| LOW | …scientific-schematics/scripts/generate_schematic_ai.py | 705 | # Check if quality is acceptable - STOP EARLY if so | COMMENT |
| LOW | …skills/citation-management/scripts/extract_metadata.py | 46 | # Check if URL | COMMENT |
| LOW | …skills/infographics/scripts/generate_infographic_ai.py | 1122 | # Check if quality is acceptable | STRING |
| LOW⚡ | …e/skills/treatment-plans/scripts/check_completeness.py | 295 | # Read file | STRING |
| LOW⚡ | …e/skills/treatment-plans/scripts/check_completeness.py | 305 | # Display results | STRING |
| LOW | …lls/treatment-plans/scripts/validate_treatment_plan.py | 353 | # Display results | STRING |
| LOW⚡ | …e/skills/treatment-plans/scripts/timeline_generator.py | 334 | # Check if any timeline info found | STRING |
| LOW | …ical-decision-support/scripts/validate_cds_document.py | 215 | # Check if gene appears but not in italics (\textit{} or \emph{}) | COMMENT |
| LOW | …nical-decision-support/scripts/create_cohort_tables.py | 47 | # Check if Fisher's exact is needed (expected count < 5) | COMMENT |
| LOW⚡ | …laude/skills/literature-review/scripts/generate_pdf.py | 44 | # Check if pandoc is installed | COMMENT |
| LOW | .claude/skills/latex-posters/scripts/review_poster.sh | 13 | # Check if file argument provided | COMMENT |
| LOW | .claude/skills/latex-posters/scripts/review_poster.sh | 22 | # Check if file exists | COMMENT |
| LOW | .claude/skills/latex-posters/scripts/review_poster.sh | 93 | # Check if file is too large for email | COMMENT |
| LOW | …aude/skills/venue-templates/scripts/validate_format.py | 175 | # Print results | COMMENT |
| LOW | …lls/scientific-slides/scripts/validate_presentation.py | 387 | # Print results | STRING |
| LOW | scripts/publish.py | 227 | # Check if tag already exists | COMMENT |
| LOW | skills/document-skills/xlsx/recalc.py | 82 | # Check if gtimeout is available on macOS | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 90 | # Check if text starts or ends with whitespace | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/docx.py | 92 | # Check if xml:space="preserve" attribute exists | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 94 | # Check if this is an ID attribute | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 97 | # Check if value looks like a UUID (has the right length and pattern structure) | COMMENT |
| LOW | …/document-skills/pptx/ooxml/scripts/validation/pptx.py | 125 | # Check if it's 32 hex-like characters (could include invalid hex chars) | COMMENT |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 449 | # Check if the ID exists | COMMENT |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 456 | # Check if we have type expectations for this element | COMMENT |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 463 | # Check if the actual type matches or contains the expected type | COMMENT |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 759 | # Check if file is in a main content folder and use appropriate schema | COMMENT |
| LOW⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 776 | # Check if attribute is from a namespace other than allowed ones | COMMENT |
| 91 more matches not shown… | ||||
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| HIGH⚡ | …scientific-schematics/scripts/generate_schematic_ai.py | 811 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …ls/scientific-schematics/scripts/generate_schematic.py | 99 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH | …skills/citation-management/references/pubmed_search.md | 385 | api_key=YOUR_API_KEY | CODE |
| HIGH | …skills/citation-management/references/pubmed_search.md | 418 | api_key=YOUR_API_KEY | CODE |
| HIGH | …skills/citation-management/references/pubmed_search.md | 442 | api_key=YOUR_API_KEY | CODE |
| HIGH | …skills/infographics/scripts/generate_infographic_ai.py | 1257 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …de/skills/infographics/scripts/generate_infographic.py | 182 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …s/scientific-slides/scripts/generate_slide_image_ai.py | 727 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …ills/scientific-slides/scripts/generate_slide_image.py | 96 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH | .claude/skills/generate-image/SKILL.md | 49 | - Create a `.env` file with `OPENROUTER_API_KEY=your-api-key-here` | CODE |
| HIGH | .claude/skills/generate-image/SKILL.md | 50 | - Or set the environment variable: `export OPENROUTER_API_KEY=your-api-key-here` | CODE |
| HIGH⚡ | .claude/skills/generate-image/scripts/generate_image.py | 108 | print("OPENROUTER_API_KEY=your-api-key-here") | CODE |
| HIGH⚡ | .claude/skills/generate-image/scripts/generate_image.py | 110 | print("export OPENROUTER_API_KEY=your-api-key-here") | CODE |
| HIGH | docs/API.md | 328 | api_key="sk-ant-your-api-key-here" | CODE |
| HIGH⚡ | …scientific-schematics/scripts/generate_schematic_ai.py | 811 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …ls/scientific-schematics/scripts/generate_schematic.py | 99 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH | skills/citation-management/references/pubmed_search.md | 385 | api_key=YOUR_API_KEY | CODE |
| HIGH | skills/citation-management/references/pubmed_search.md | 418 | api_key=YOUR_API_KEY | CODE |
| HIGH | skills/citation-management/references/pubmed_search.md | 442 | api_key=YOUR_API_KEY | CODE |
| HIGH | skills/infographics/scripts/generate_infographic_ai.py | 1257 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | skills/infographics/scripts/generate_infographic.py | 182 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …s/scientific-slides/scripts/generate_slide_image_ai.py | 727 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …ills/scientific-slides/scripts/generate_slide_image.py | 96 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH | skills/generate-image/SKILL.md | 49 | - Create a `.env` file with `OPENROUTER_API_KEY=your-api-key-here` | CODE |
| HIGH | skills/generate-image/SKILL.md | 50 | - Or set the environment variable: `export OPENROUTER_API_KEY=your-api-key-here` | CODE |
| HIGH⚡ | skills/generate-image/scripts/generate_image.py | 108 | print("OPENROUTER_API_KEY=your-api-key-here") | CODE |
| HIGH⚡ | skills/generate-image/scripts/generate_image.py | 110 | print("export OPENROUTER_API_KEY=your-api-key-here") | CODE |
| HIGH⚡ | …scientific-schematics/scripts/generate_schematic_ai.py | 811 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …ls/scientific-schematics/scripts/generate_schematic.py | 99 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH | …skills/citation-management/references/pubmed_search.md | 385 | api_key=YOUR_API_KEY | CODE |
| HIGH | …skills/citation-management/references/pubmed_search.md | 418 | api_key=YOUR_API_KEY | CODE |
| HIGH | …skills/citation-management/references/pubmed_search.md | 442 | api_key=YOUR_API_KEY | CODE |
| HIGH | …skills/infographics/scripts/generate_infographic_ai.py | 1257 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …de/skills/infographics/scripts/generate_infographic.py | 182 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …s/scientific-slides/scripts/generate_slide_image_ai.py | 727 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH⚡ | …ills/scientific-slides/scripts/generate_slide_image.py | 96 | print(" export OPENROUTER_API_KEY='your_api_key'") | STRING |
| HIGH | …ientific_writer/.claude/skills/generate-image/SKILL.md | 49 | - Create a `.env` file with `OPENROUTER_API_KEY=your-api-key-here` | CODE |
| HIGH | …ientific_writer/.claude/skills/generate-image/SKILL.md | 50 | - Or set the environment variable: `export OPENROUTER_API_KEY=your-api-key-here` | CODE |
| HIGH⚡ | …claude/skills/generate-image/scripts/generate_image.py | 108 | print("OPENROUTER_API_KEY=your-api-key-here") | CODE |
| HIGH⚡ | …claude/skills/generate-image/scripts/generate_image.py | 110 | print("export OPENROUTER_API_KEY=your-api-key-here") | CODE |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| HIGH | .claude/skills/document-skills/docx/scripts/document.py | 265 | Reject an insertion by wrapping its content in a deletion. Wraps all runs inside w:ins in w:del, converting w:t | STRING |
| HIGH | .claude/skills/document-skills/docx/scripts/document.py | 343 | Reject a deletion by re-inserting the deleted content. Creates w:ins elements after each w:del, copying deleted | STRING |
| HIGH | .claude/skills/document-skills/docx/scripts/document.py | 483 | Mark a w:r or w:p element as deleted with tracked changes (in-place DOM manipulation). For w:r: wraps in <w:del | STRING |
| HIGH | .claude/skills/document-skills/docx/scripts/document.py | 681 | Get or create a DocxXMLEditor for the specified XML file. Enables lazy-loaded editors with bracket not | STRING |
| HIGH | …laude/skills/document-skills/docx/scripts/utilities.py | 83 | Get a DOM element by tag and identifier. Finds an element by either its line number in the original fi | STRING |
| HIGH | …laude/skills/document-skills/docx/scripts/utilities.py | 313 | Parse XML fragment and return list of imported nodes. Args: xml_content: String containing | STRING |
| HIGH | extensions/docx-editor-zotero/word_editor.py | 219 | Validate and save the edited document Args: output_path: Path for output .docx | STRING |
| HIGH | skills/document-skills/docx/scripts/document.py | 265 | Reject an insertion by wrapping its content in a deletion. Wraps all runs inside w:ins in w:del, converting w:t | STRING |
| HIGH | skills/document-skills/docx/scripts/document.py | 343 | Reject a deletion by re-inserting the deleted content. Creates w:ins elements after each w:del, copying deleted | STRING |
| HIGH | skills/document-skills/docx/scripts/document.py | 483 | Mark a w:r or w:p element as deleted with tracked changes (in-place DOM manipulation). For w:r: wraps in <w:del | STRING |
| HIGH | skills/document-skills/docx/scripts/document.py | 681 | Get or create a DocxXMLEditor for the specified XML file. Enables lazy-loaded editors with bracket not | STRING |
| HIGH | skills/document-skills/docx/scripts/utilities.py | 83 | Get a DOM element by tag and identifier. Finds an element by either its line number in the original fi | STRING |
| HIGH | skills/document-skills/docx/scripts/utilities.py | 313 | Parse XML fragment and return list of imported nodes. Args: xml_content: String containing | STRING |
| HIGH | scientific_writer/core.py | 81 | Get the Anthropic API key. Args: api_key: Optional API key to use. If not provided, reads from environ | STRING |
| HIGH | …claude/skills/document-skills/docx/scripts/document.py | 265 | Reject an insertion by wrapping its content in a deletion. Wraps all runs inside w:ins in w:del, converting w:t | STRING |
| HIGH | …claude/skills/document-skills/docx/scripts/document.py | 343 | Reject a deletion by re-inserting the deleted content. Creates w:ins elements after each w:del, copying deleted | STRING |
| HIGH | …claude/skills/document-skills/docx/scripts/document.py | 483 | Mark a w:r or w:p element as deleted with tracked changes (in-place DOM manipulation). For w:r: wraps in <w:del | STRING |
| HIGH | …claude/skills/document-skills/docx/scripts/document.py | 681 | Get or create a DocxXMLEditor for the specified XML file. Enables lazy-loaded editors with bracket not | STRING |
| HIGH | …laude/skills/document-skills/docx/scripts/utilities.py | 83 | Get a DOM element by tag and identifier. Finds an element by either its line number in the original fi | STRING |
| HIGH | …laude/skills/document-skills/docx/scripts/utilities.py | 313 | Parse XML fragment and return list of imported nodes. Args: xml_content: String containing | STRING |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 5 | CODE | |
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 6 | CODE | |
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 7 | CODE | |
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 8 | CODE | |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 5 | CODE | |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 6 | CODE | |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 7 | CODE | |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 8 | CODE | |
| LOW | .claude/skills/research-lookup/research_lookup.py | 19 | CODE | |
| LOW | .claude/skills/research-lookup/lookup.py | 9 | CODE | |
| LOW | .claude/skills/research-lookup/lookup.py | 10 | CODE | |
| LOW | …aude/skills/research-lookup/scripts/research_lookup.py | 19 | CODE | |
| LOW | …de/skills/citation-management/scripts/format_bibtex.py | 10 | CODE | |
| LOW | .claude/skills/markitdown/scripts/convert_literature.py | 14 | CODE | |
| LOW | …ical-decision-support/scripts/validate_cds_document.py | 19 | CODE | |
| LOW | …inical-decision-support/scripts/build_decision_tree.py | 12 | CODE | |
| LOW | …e/skills/literature-review/scripts/verify_citations.py | 11 | CODE | |
| LOW | …/skills/scholar-evaluation/scripts/calculate_scores.py | 20 | CODE | |
| LOW | …et-research-reports/scripts/generate_market_visuals.py | 23 | CODE | |
| LOW | …aude/skills/venue-templates/scripts/validate_format.py | 15 | CODE | |
| LOW | …laude/skills/venue-templates/scripts/query_template.py | 14 | CODE | |
| LOW | …ills/clinical-reports/scripts/validate_trial_report.py | 14 | CODE | |
| LOW | …lls/clinical-reports/scripts/check_deidentification.py | 16 | CODE | |
| LOW | …kills/clinical-reports/scripts/validate_case_report.py | 17 | CODE | |
| LOW | …ills/clinical-reports/scripts/format_adverse_events.py | 14 | CODE | |
| LOW | …lls/scientific-slides/scripts/validate_presentation.py | 13 | CODE | |
| LOW | …lls/scientific-slides/scripts/validate_presentation.py | 17 | CODE | |
| LOW | …lls/scientific-slides/scripts/validate_presentation.py | 17 | CODE | |
| LOW | extensions/docx-editor-zotero/word_editor.py | 16 | CODE | |
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 5 | CODE | |
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 6 | CODE | |
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 7 | CODE | |
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 8 | CODE | |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 5 | CODE | |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 6 | CODE | |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 7 | CODE | |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 8 | CODE | |
| LOW | skills/research-lookup/research_lookup.py | 19 | CODE | |
| LOW | skills/research-lookup/lookup.py | 9 | CODE | |
| LOW | skills/research-lookup/lookup.py | 10 | CODE | |
| LOW | skills/research-lookup/scripts/research_lookup.py | 19 | CODE | |
| LOW | skills/citation-management/scripts/format_bibtex.py | 10 | CODE | |
| LOW | skills/markitdown/scripts/convert_literature.py | 14 | CODE | |
| LOW | …ical-decision-support/scripts/validate_cds_document.py | 19 | CODE | |
| LOW | …inical-decision-support/scripts/build_decision_tree.py | 12 | CODE | |
| LOW | skills/literature-review/scripts/verify_citations.py | 11 | CODE | |
| LOW | skills/scholar-evaluation/scripts/calculate_scores.py | 20 | CODE | |
| LOW | …et-research-reports/scripts/generate_market_visuals.py | 23 | CODE | |
| LOW | skills/venue-templates/scripts/validate_format.py | 15 | CODE | |
| LOW | skills/venue-templates/scripts/query_template.py | 14 | CODE | |
| LOW | …ills/clinical-reports/scripts/validate_trial_report.py | 14 | CODE | |
| LOW | …lls/clinical-reports/scripts/check_deidentification.py | 16 | CODE | |
| LOW | skills/clinical-reports/scripts/validate_case_report.py | 17 | CODE | |
| LOW | …ills/clinical-reports/scripts/format_adverse_events.py | 14 | CODE | |
| LOW | …lls/scientific-slides/scripts/validate_presentation.py | 13 | CODE | |
| LOW | …lls/scientific-slides/scripts/validate_presentation.py | 17 | CODE | |
| LOW | …lls/scientific-slides/scripts/validate_presentation.py | 17 | CODE | |
| LOW | scientific_writer/__init__.py | 33 | CODE | |
| LOW | scientific_writer/__init__.py | 34 | CODE | |
| LOW | scientific_writer/__init__.py | 34 | CODE | |
| 32 more matches not shown… | ||||
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| MEDIUM⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 767 | # Create a clean copy | COMMENT |
| MEDIUM | …/document-skills/pptx/ooxml/scripts/validation/base.py | 919 | # Create a copy of the document to avoid modifying the original | COMMENT |
| MEDIUM | …/document-skills/pptx/ooxml/scripts/validation/base.py | 298 | ): # This file is not referenced by .rels | CODE |
| MEDIUM | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 401 | # Create a highlight overlay | COMMENT |
| MEDIUM | …laude/skills/document-skills/pptx/scripts/rearrange.py | 108 | # Create a new relationship in the destination slide for this image | COMMENT |
| MEDIUM⚡ | …/document-skills/docx/ooxml/scripts/validation/base.py | 767 | # Create a clean copy | COMMENT |
| MEDIUM | …/document-skills/docx/ooxml/scripts/validation/base.py | 919 | # Create a copy of the document to avoid modifying the original | COMMENT |
| MEDIUM | …/document-skills/docx/ooxml/scripts/validation/base.py | 298 | ): # This file is not referenced by .rels | CODE |
| MEDIUM | .claude/skills/document-skills/docx/scripts/document.py | 984 | # Create the relationship entry | COMMENT |
| MEDIUM⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 767 | # Create a clean copy | COMMENT |
| MEDIUM | …/document-skills/pptx/ooxml/scripts/validation/base.py | 919 | # Create a copy of the document to avoid modifying the original | COMMENT |
| MEDIUM | …/document-skills/pptx/ooxml/scripts/validation/base.py | 298 | ): # This file is not referenced by .rels | CODE |
| MEDIUM | skills/document-skills/pptx/scripts/thumbnail.py | 401 | # Create a highlight overlay | COMMENT |
| MEDIUM | skills/document-skills/pptx/scripts/rearrange.py | 108 | # Create a new relationship in the destination slide for this image | COMMENT |
| MEDIUM⚡ | …/document-skills/docx/ooxml/scripts/validation/base.py | 767 | # Create a clean copy | COMMENT |
| MEDIUM | …/document-skills/docx/ooxml/scripts/validation/base.py | 919 | # Create a copy of the document to avoid modifying the original | COMMENT |
| MEDIUM | …/document-skills/docx/ooxml/scripts/validation/base.py | 298 | ): # This file is not referenced by .rels | CODE |
| MEDIUM | skills/document-skills/docx/scripts/document.py | 984 | # Create the relationship entry | COMMENT |
| MEDIUM⚡ | …/document-skills/pptx/ooxml/scripts/validation/base.py | 767 | # Create a clean copy | COMMENT |
| MEDIUM | …/document-skills/pptx/ooxml/scripts/validation/base.py | 919 | # Create a copy of the document to avoid modifying the original | COMMENT |
| MEDIUM | …/document-skills/pptx/ooxml/scripts/validation/base.py | 298 | ): # This file is not referenced by .rels | CODE |
| MEDIUM | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 401 | # Create a highlight overlay | COMMENT |
| MEDIUM | …laude/skills/document-skills/pptx/scripts/rearrange.py | 108 | # Create a new relationship in the destination slide for this image | COMMENT |
| MEDIUM⚡ | …/document-skills/docx/ooxml/scripts/validation/base.py | 767 | # Create a clean copy | COMMENT |
| MEDIUM | …/document-skills/docx/ooxml/scripts/validation/base.py | 919 | # Create a copy of the document to avoid modifying the original | COMMENT |
| MEDIUM | …/document-skills/docx/ooxml/scripts/validation/base.py | 298 | ): # This file is not referenced by .rels | CODE |
| MEDIUM | …claude/skills/document-skills/docx/scripts/document.py | 984 | # Create the relationship entry | COMMENT |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| MEDIUM | .claude/skills/research-lookup/research_lookup.py | 423 | # Deep research (uses Parallel Chat API - slow but comprehensive) | COMMENT |
| MEDIUM | …aude/skills/research-lookup/scripts/research_lookup.py | 423 | # Deep research (uses Parallel Chat API - slow but comprehensive) | COMMENT |
| MEDIUM | …scientific-schematics/scripts/generate_schematic_ai.py | 101 | # Scientific diagram best practices prompt template | COMMENT |
| MEDIUM | …lls/treatment-plans/scripts/validate_treatment_plan.py | 178 | """Display comprehensive validation results.""" | STRING |
| MEDIUM | …/skills/scholar-evaluation/scripts/calculate_scores.py | 149 | """Generate comprehensive evaluation report.""" | STRING |
| MEDIUM | …et-research-reports/scripts/generate_market_visuals.py | 15 | # Generate all 28 visuals (for comprehensive coverage) | STRING |
| MEDIUM | …kills/clinical-reports/scripts/validate_case_report.py | 192 | """Generate comprehensive validation report.""" | STRING |
| MEDIUM | skills/research-lookup/research_lookup.py | 423 | # Deep research (uses Parallel Chat API - slow but comprehensive) | COMMENT |
| MEDIUM | skills/research-lookup/scripts/research_lookup.py | 423 | # Deep research (uses Parallel Chat API - slow but comprehensive) | COMMENT |
| MEDIUM | …scientific-schematics/scripts/generate_schematic_ai.py | 101 | # Scientific diagram best practices prompt template | COMMENT |
| MEDIUM | …lls/treatment-plans/scripts/validate_treatment_plan.py | 178 | """Display comprehensive validation results.""" | STRING |
| MEDIUM | skills/scholar-evaluation/scripts/calculate_scores.py | 149 | """Generate comprehensive evaluation report.""" | STRING |
| MEDIUM | …et-research-reports/scripts/generate_market_visuals.py | 15 | # Generate all 28 visuals (for comprehensive coverage) | STRING |
| MEDIUM | skills/clinical-reports/scripts/validate_case_report.py | 192 | """Generate comprehensive validation report.""" | STRING |
| MEDIUM | scientific_writer/api.py | 333 | # Build comprehensive result | STRING |
| MEDIUM | …iter/.claude/skills/research-lookup/research_lookup.py | 423 | # Deep research (uses Parallel Chat API - slow but comprehensive) | COMMENT |
| MEDIUM | …aude/skills/research-lookup/scripts/research_lookup.py | 423 | # Deep research (uses Parallel Chat API - slow but comprehensive) | COMMENT |
| MEDIUM | …scientific-schematics/scripts/generate_schematic_ai.py | 101 | # Scientific diagram best practices prompt template | COMMENT |
| MEDIUM | …lls/treatment-plans/scripts/validate_treatment_plan.py | 178 | """Display comprehensive validation results.""" | STRING |
| MEDIUM | …/skills/scholar-evaluation/scripts/calculate_scores.py | 149 | """Generate comprehensive evaluation report.""" | STRING |
| MEDIUM | …et-research-reports/scripts/generate_market_visuals.py | 15 | # Generate all 28 visuals (for comprehensive coverage) | STRING |
| MEDIUM | …kills/clinical-reports/scripts/validate_case_report.py | 192 | """Generate comprehensive validation report.""" | STRING |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| HIGH | …e/skills/treatment-plans/scripts/check_completeness.py | 257 | python check_completeness.py plan.tex && echo "Complete" | CODE |
| HIGH | …lls/treatment-plans/scripts/validate_treatment_plan.py | 313 | python validate_treatment_plan.py plan.tex && echo "Quality check passed" | CODE |
| HIGH⚡ | scripts/bump_version.py | 291 | print(f" 3. Commit changes: git add -A && git commit -m 'Bump version to {new_version}'") | CODE |
| HIGH | skills/treatment-plans/scripts/check_completeness.py | 257 | python check_completeness.py plan.tex && echo "Complete" | CODE |
| HIGH | …lls/treatment-plans/scripts/validate_treatment_plan.py | 313 | python validate_treatment_plan.py plan.tex && echo "Quality check passed" | CODE |
| HIGH | …e/skills/treatment-plans/scripts/check_completeness.py | 257 | python check_completeness.py plan.tex && echo "Complete" | CODE |
| HIGH | …lls/treatment-plans/scripts/validate_treatment_plan.py | 313 | python validate_treatment_plan.py plan.tex && echo "Quality check passed" | CODE |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW | .claude/skills/document-skills/pptx/SKILL.md | 188 | - Use `class="placeholder"` for areas where charts/tables will be added (render with gray background for visibility) | CODE |
| LOW | .claude/skills/document-skills/pptx/html2pptx.md | 34 | - `class="placeholder"` - Reserved space for charts (returns `{ id, x, y, w, h }`) | CODE |
| LOW | .claude/skills/document-skills/pptx/html2pptx.md | 172 | <div id="chart" class="placeholder" style="width: 350pt; height: 200pt;"></div> | CODE |
| LOW | …laude/skills/document-skills/pptx/scripts/html2pptx.js | 16 | * - Extracts placeholder elements (class="placeholder") with positions | COMMENT |
| LOW | …laude/skills/document-skills/pptx/scripts/html2pptx.js | 558 | if (el.className && el.className.includes('placeholder')) { | CODE |
| LOW | .claude/skills/document-skills/docx/ooxml.md | 298 | doc = Document('unpacked', author="John Doe", initials="JD") | CODE |
| LOW | .claude/skills/document-skills/docx/scripts/document.py | 10 | doc = Document('workspace/unpacked', author="John Doe", initials="JD") | STRING |
| LOW | …e/skills/pptx-posters/assets/poster_html_template.html | 206 | <div id="chart1" class="placeholder" style="width: 100%; height: 400pt;"></div> | CODE |
| LOW | …skills/pptx-posters/assets/poster_quality_checklist.md | 15 | - [ ] No placeholder text remaining (TODO, Lorem ipsum, etc.) | CODE |
| LOW | .claude/skills/latex-posters/SKILL.md | 1068 | - [ ] No placeholder text remaining (Lorem ipsum, TODO, etc.) | CODE |
| LOW | .claude/skills/latex-posters/scripts/review_poster.sh | 179 | echo " [ ] No placeholder text (Lorem ipsum, TODO, etc.)" | CODE |
| LOW | …kills/latex-posters/assets/poster_quality_checklist.md | 15 | - [ ] No placeholder text remaining (TODO, Lorem ipsum, etc.) | CODE |
| LOW | skills/document-skills/pptx/SKILL.md | 188 | - Use `class="placeholder"` for areas where charts/tables will be added (render with gray background for visibility) | CODE |
| LOW | skills/document-skills/pptx/html2pptx.md | 34 | - `class="placeholder"` - Reserved space for charts (returns `{ id, x, y, w, h }`) | CODE |
| LOW | skills/document-skills/pptx/html2pptx.md | 172 | <div id="chart" class="placeholder" style="width: 350pt; height: 200pt;"></div> | CODE |
| LOW | skills/document-skills/pptx/scripts/html2pptx.js | 16 | * - Extracts placeholder elements (class="placeholder") with positions | COMMENT |
| LOW | skills/document-skills/pptx/scripts/html2pptx.js | 558 | if (el.className && el.className.includes('placeholder')) { | CODE |
| LOW | skills/document-skills/docx/ooxml.md | 298 | doc = Document('unpacked', author="John Doe", initials="JD") | CODE |
| LOW | skills/document-skills/docx/scripts/document.py | 10 | doc = Document('workspace/unpacked', author="John Doe", initials="JD") | STRING |
| LOW | skills/pptx-posters/assets/poster_html_template.html | 206 | <div id="chart1" class="placeholder" style="width: 100%; height: 400pt;"></div> | CODE |
| LOW | skills/pptx-posters/assets/poster_quality_checklist.md | 15 | - [ ] No placeholder text remaining (TODO, Lorem ipsum, etc.) | CODE |
| LOW | skills/latex-posters/SKILL.md | 1068 | - [ ] No placeholder text remaining (Lorem ipsum, TODO, etc.) | CODE |
| LOW | skills/latex-posters/scripts/review_poster.sh | 179 | echo " [ ] No placeholder text (Lorem ipsum, TODO, etc.)" | CODE |
| LOW | skills/latex-posters/assets/poster_quality_checklist.md | 15 | - [ ] No placeholder text remaining (TODO, Lorem ipsum, etc.) | CODE |
| LOW | …ic_writer/.claude/skills/document-skills/pptx/SKILL.md | 188 | - Use `class="placeholder"` for areas where charts/tables will be added (render with gray background for visibility) | CODE |
| LOW | …riter/.claude/skills/document-skills/pptx/html2pptx.md | 34 | - `class="placeholder"` - Reserved space for charts (returns `{ id, x, y, w, h }`) | CODE |
| LOW | …riter/.claude/skills/document-skills/pptx/html2pptx.md | 172 | <div id="chart" class="placeholder" style="width: 350pt; height: 200pt;"></div> | CODE |
| LOW | …laude/skills/document-skills/pptx/scripts/html2pptx.js | 16 | * - Extracts placeholder elements (class="placeholder") with positions | COMMENT |
| LOW | …laude/skills/document-skills/pptx/scripts/html2pptx.js | 558 | if (el.className && el.className.includes('placeholder')) { | CODE |
| LOW | …ic_writer/.claude/skills/document-skills/docx/ooxml.md | 298 | doc = Document('unpacked', author="John Doe", initials="JD") | CODE |
| LOW | …claude/skills/document-skills/docx/scripts/document.py | 10 | doc = Document('workspace/unpacked', author="John Doe", initials="JD") | STRING |
| LOW | …e/skills/pptx-posters/assets/poster_html_template.html | 206 | <div id="chart1" class="placeholder" style="width: 100%; height: 400pt;"></div> | CODE |
| LOW | …skills/pptx-posters/assets/poster_quality_checklist.md | 15 | - [ ] No placeholder text remaining (TODO, Lorem ipsum, etc.) | CODE |
| LOW | scientific_writer/.claude/skills/latex-posters/SKILL.md | 1068 | - [ ] No placeholder text remaining (Lorem ipsum, TODO, etc.) | CODE |
| LOW | …/.claude/skills/latex-posters/scripts/review_poster.sh | 179 | echo " [ ] No placeholder text (Lorem ipsum, TODO, etc.)" | CODE |
| LOW | …kills/latex-posters/assets/poster_quality_checklist.md | 15 | - [ ] No placeholder text remaining (TODO, Lorem ipsum, etc.) | CODE |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW | example_api_usage.py | 181 | print() | COMMENT |
| LOW | pyproject.toml | 21 | # LaTeX Distribution (required for PDF compilation): | COMMENT |
| LOW | pyproject.toml | 81 | COMMENT | |
| LOW | pyproject.toml | 101 | # promis - PROMIS patient-reported outcome measures | COMMENT |
| LOW | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 21 | Usage: | COMMENT |
| LOW | .claude/skills/markitdown/SKILL.md | 181 | ## Optional Dependencies | COMMENT |
| LOW | …nical-decision-support/scripts/biomarker_classifier.py | 381 | # PT001,55.5,12.3,1+,Yes,14.2,1 | COMMENT |
| LOW | …inical-decision-support/scripts/build_decision_tree.py | 441 | # Example usage: | COMMENT |
| LOW | …nical-decision-support/scripts/create_cohort_tables.py | 521 | # PT001,Biomarker+,65,Male,0-1,IV,PR,1,0,... | COMMENT |
| LOW | …ls/literature-review/references/database_strategies.md | 421 | # 2. Search bioRxiv | COMMENT |
| LOW | .claude/skills/latex-posters/SKILL.md | 481 | # Timeline - ONLY 3 key years (not 7 years) | COMMENT |
| LOW | skills/document-skills/pptx/scripts/thumbnail.py | 21 | Usage: | COMMENT |
| LOW | skills/markitdown/SKILL.md | 181 | ## Optional Dependencies | COMMENT |
| LOW | …nical-decision-support/scripts/biomarker_classifier.py | 381 | # PT001,55.5,12.3,1+,Yes,14.2,1 | COMMENT |
| LOW | …inical-decision-support/scripts/build_decision_tree.py | 441 | # Example usage: | COMMENT |
| LOW | …nical-decision-support/scripts/create_cohort_tables.py | 521 | # PT001,Biomarker+,65,Male,0-1,IV,PR,1,0,... | COMMENT |
| LOW | …ls/literature-review/references/database_strategies.md | 421 | # 2. Search bioRxiv | COMMENT |
| LOW | skills/latex-posters/SKILL.md | 481 | # Timeline - ONLY 3 key years (not 7 years) | COMMENT |
| LOW | …laude/skills/document-skills/pptx/scripts/thumbnail.py | 21 | Usage: | COMMENT |
| LOW | scientific_writer/.claude/skills/markitdown/SKILL.md | 181 | ## Optional Dependencies | COMMENT |
| LOW | …nical-decision-support/scripts/biomarker_classifier.py | 381 | # PT001,55.5,12.3,1+,Yes,14.2,1 | COMMENT |
| LOW | …inical-decision-support/scripts/build_decision_tree.py | 441 | # Example usage: | COMMENT |
| LOW | …nical-decision-support/scripts/create_cohort_tables.py | 521 | # PT001,Biomarker+,65,Male,0-1,IV,PR,1,0,... | COMMENT |
| LOW | …ls/literature-review/references/database_strategies.md | 421 | # 2. Search bioRxiv | COMMENT |
| LOW | scientific_writer/.claude/skills/latex-posters/SKILL.md | 481 | # Timeline - ONLY 3 key years (not 7 years) | COMMENT |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW | …decision-support/scripts/generate_survival_analysis.py | 413 | # Example usage: | COMMENT |
| LOW | …ical-decision-support/scripts/validate_cds_document.py | 331 | # Example usage: | COMMENT |
| LOW | …nical-decision-support/scripts/biomarker_classifier.py | 375 | # Example usage: | COMMENT |
| LOW | …inical-decision-support/scripts/build_decision_tree.py | 441 | # Example usage: | COMMENT |
| LOW | …nical-decision-support/scripts/create_cohort_tables.py | 515 | # Example usage: | COMMENT |
| LOW | …decision-support/scripts/generate_survival_analysis.py | 413 | # Example usage: | COMMENT |
| LOW | …ical-decision-support/scripts/validate_cds_document.py | 331 | # Example usage: | COMMENT |
| LOW | …nical-decision-support/scripts/biomarker_classifier.py | 375 | # Example usage: | COMMENT |
| LOW | …inical-decision-support/scripts/build_decision_tree.py | 441 | # Example usage: | COMMENT |
| LOW | …nical-decision-support/scripts/create_cohort_tables.py | 515 | # Example usage: | COMMENT |
| LOW | …decision-support/scripts/generate_survival_analysis.py | 413 | # Example usage: | COMMENT |
| LOW | …ical-decision-support/scripts/validate_cds_document.py | 331 | # Example usage: | COMMENT |
| LOW | …nical-decision-support/scripts/biomarker_classifier.py | 375 | # Example usage: | COMMENT |
| LOW | …inical-decision-support/scripts/build_decision_tree.py | 441 | # Example usage: | COMMENT |
| LOW | …nical-decision-support/scripts/create_cohort_tables.py | 515 | # Example usage: | COMMENT |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW | …laude/skills/document-skills/pptx/scripts/rearrange.py | 176 | # Step 1: DUPLICATE repeated slides | COMMENT |
| LOW⚡ | …laude/skills/document-skills/pptx/scripts/rearrange.py | 200 | # Step 2: DELETE unwanted slides (work backwards) | COMMENT |
| LOW⚡ | …laude/skills/document-skills/pptx/scripts/rearrange.py | 209 | # Step 3: REORDER to final sequence | COMMENT |
| LOW | skills/document-skills/pptx/scripts/rearrange.py | 176 | # Step 1: DUPLICATE repeated slides | COMMENT |
| LOW⚡ | skills/document-skills/pptx/scripts/rearrange.py | 200 | # Step 2: DELETE unwanted slides (work backwards) | COMMENT |
| LOW⚡ | skills/document-skills/pptx/scripts/rearrange.py | 209 | # Step 3: REORDER to final sequence | COMMENT |
| LOW | …laude/skills/document-skills/pptx/scripts/rearrange.py | 176 | # Step 1: DUPLICATE repeated slides | COMMENT |
| LOW⚡ | …laude/skills/document-skills/pptx/scripts/rearrange.py | 200 | # Step 2: DELETE unwanted slides (work backwards) | COMMENT |
| LOW⚡ | …laude/skills/document-skills/pptx/scripts/rearrange.py | 209 | # Step 3: REORDER to final sequence | COMMENT |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| HIGH | .claude/skills/latex-posters/SKILL.md | 112 | The #1 issue with AI-generated poster graphics is **TOO MUCH CONTENT**. This causes: | CODE |
| HIGH | skills/latex-posters/SKILL.md | 112 | The #1 issue with AI-generated poster graphics is **TOO MUCH CONTENT**. This causes: | CODE |
| HIGH | scientific_writer/.claude/skills/latex-posters/SKILL.md | 112 | The #1 issue with AI-generated poster graphics is **TOO MUCH CONTENT**. This causes: | CODE |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 10 | __all__ = [ | CODE |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 10 | __all__ = [ | CODE |
| LOW | extensions/docx-editor-zotero/word_editor.py | 20 | logger = logging.getLogger(__name__) | CODE |
| LOW | extensions/docx-editor-zotero/zotero_docx_preserver.py | 41 | logger = logging.getLogger(__name__) | CODE |
| LOW | scripts/bump_version.py | 115 | def update_pyproject_version(pyproject_path: Path, new_version: str) -> None: | CODE |
| LOW | scripts/bump_version.py | 143 | def update_init_version(init_path: Path, new_version: str) -> None: | CODE |
| LOW | scripts/bump_version.py | 171 | def update_marketplace_version(marketplace_path: Path, new_version: str) -> None: | CODE |
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 10 | __all__ = [ | CODE |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 10 | __all__ = [ | CODE |
| LOW | scientific_writer/__init__.py | 40 | __all__ = [ | CODE |
| LOW | scientific_writer/core.py | 14 | logger = logging.getLogger(__name__) | CODE |
| LOW | …ument-skills/pptx/ooxml/scripts/validation/__init__.py | 10 | __all__ = [ | CODE |
| LOW | …ument-skills/docx/ooxml/scripts/validation/__init__.py | 10 | __all__ = [ | CODE |
| Severity | File | Line | Snippet | Context |
|---|---|---|---|---|
| LOW | …nical-decision-support/scripts/create_cohort_tables.py | 419 | CODE | |
| LOW | scripts/publish.py | 91 | CODE | |
| LOW | …nical-decision-support/scripts/create_cohort_tables.py | 419 | CODE | |
| LOW | scientific_writer/api.py | 61 | CODE | |
| LOW | scientific_writer/api.py | 694 | CODE | |
| LOW | …nical-decision-support/scripts/create_cohort_tables.py | 419 | CODE |